Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846477.1_cds_XP_016509654.1_22567
CDS Infomation

[gene=LOC107827107] [db_xref=GeneID:107827107] [protein=KH domain-containing protein At4g18375 isoform X3] [protein_id=XP_016509654.1] [location=complement(join(7515..7655,7730..7841,8980..9056,9336..9391,9492..9540,10201..10452,10721..11095,13107..13802))] [gbkey=CDS]
Sequence

ATGGACGCATCCTTGGCGCAGAAGCGACAGCTGGACTCCACCACAGCAGATACTTCCACT
GCTTCCACTCCCACCAAGCGCCGCCACCAATTACAGTCTTCCTCTGCAACTCCGCCGTCC
AATACCTTCCGTACACCACCGCCGCCTCCTTTTCTGAAGCTCGCTCCTAGTGAAGCCTTT
TTCCGTATCCTCTGTCCGGCGGACAAAACCGGCGGCGTCATCGGAAAAGGCGGCGCCATC
ATCCGCCAGGTCCGAGAGGAGACCGGAGCTAAAATTCGTATCGACGATTCACTTCCCGGC
TGCGATGAGCGCGTTATTGTTATAATAGCCGACTCGACGAAGAAAGAGTGCAGCTCAGCT
GCTAATTCCAGTGCCGAAGAATTAGCAAATTTGGACGACGAGTCATCGTCATCGCAGGCT
CAGCGGGCGTTGATTAGAGTTTTCGAGAGGATATTGAAGGTGGACGAGGAGCGGAATGCG
GAAGGGGAGGGGAGGAAGGATGAATGTAGTGATGTGTCGGGTCCACAGGGAGTGGTTGTT
TGTAGACTGTTAGCACCGAGTAATCAGGTTGGCAGCGTGCTAGGCAGAGGGGGGAAGATT
ATTGAGAAGATAAGACAGGAGGCTGGAGCTCAAGTTAGGGTTTTACCTAAAGATCAGTTG
CCTGCTTGTGCTTCACCTGGTGACGAGTTAATTCAGATAACCGGAAGCTTTTCAGCTGTG
AGAAAAGCTCTGTTGTCTGTTTCAAGTTGTCTTCAGGATAACTCGAGGATAGATTCAGTA
AATGCCTCTACCCCAAAATTTTCAGCAATGTCACAAACTGGAACTGGTTATCACACTCCA
GATCAGTTTTCAAGGAGTTCTGGTGTTGAAAGTGCTGGAATCAACCACAGGATGGTCTTG
GAGGAAGAGATTGTGTTTAAGGTGTTGTGTCCGGTTGACAAAGTTGGAAACTTAATAGGA
AAAGGAGGCTCAATTATAAGGGTGATGCAGAATGAAACTGGTGCATCTATCAAGATTGCT
GATTCAGCATCTGATTTAGATGAAAGAGTTGTTGTGATATCTGCTAGGGAGAACCCAGAG
CAAAGAAATTCCCCTGCTCAGGAAGCTCTTCTTCGTGTACAGGCCAGAATTGCTGAGATT
GGATTTGAACCAGGAGCTGCAGTTGTTTCAAGGCTTCTGGTACATGCACGTCACATGAGT
TGTCTCTTTGGTAATGGAAGTATTCTAATTGCTGAATTGCGACGACTCACTGGTGCTAGT
ATACGTATTTTTCCTAGAGAACATTCTCCAAAATATGGTTCCCACACTGAAGAAATTTTA
CAGGTTATTGGGAGCATGCACTCTGTCCAGGATGCTTTGTTCCAAATTACTTGCCAAGGC
ACGATCCTGCTTCTCCTAGTTACCGCTCACCTGCTGGCTACCCTCATGGCAGTCAATTCT
AGATATACAGCTGGAGTGGCTGATTTAAGTGGAGGCTTTGCCTTGAAGAATGGCCACAGT
GGCAGTGAGACGGCAACACCTAATTTGGCAGGCATTGTTATTGAAGTTGTAATTCCTCAG
ATGTTGTTAAAACACGTGTATGGAGAGGATTCTAGCAACCTTAGTGATATAGCAAGGATT
TCAGGTGCTAAGATAGTAGTTCATGATCCTGTAGCCAATTCTGCAGAAGGCACTGTTGTT
GTGTCGGGGACACCAGATCAAGCACGAGCCGCTCAGAGCCTTATTCATGCCTTCATTTTA
TCTGAGCAGAATATGTAG

Peptide Sequence

PEP ID

XP_016509654.1
PEP Infomation

PREDICTED: KH domain-containing protein At4g18375 isoform X3 [Nicotiana tabacum]
Sequence

MDASLAQKRQLDSTTADTSTASTPTKRRHQLQSSSATPPSNTFRTPPPPPFLKLAPSEAF
FRILCPADKTGGVIGKGGAIIRQVREETGAKIRIDDSLPGCDERVIVIIADSTKKECSSA
ANSSAEELANLDDESSSSQAQRALIRVFERILKVDEERNAEGEGRKDECSDVSGPQGVVV
CRLLAPSNQVGSVLGRGGKIIEKIRQEAGAQVRVLPKDQLPACASPGDELIQITGSFSAV
RKALLSVSSCLQDNSRIDSVNASTPKFSAMSQTGTGYHTPDQFSRSSGVESAGINHRMVL
EEEIVFKVLCPVDKVGNLIGKGGSIIRVMQNETGASIKIADSASDLDERVVVISARENPE
QRNSPAQEALLRVQARIAEIGFEPGAAVVSRLLVHARHMSCLFGNGSILIAELRRLTGAS
IRIFPREHSPKYGSHTEEILQVIGSMHSVQDALFQITCQGTILLLLVTAHLLATLMAVNS
RYTAGVADLSGGFALKNGHSGSETATPNLAGIVIEVVIPQMLLKHVYGEDSSNLSDIARI
SGAKIVVHDPVANSAEGTVVVSGTPDQARAAQSLIHAFILSEQNM

Transcript Sequence

Gene sequence data has not been registered.